BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F06SP1|AL430087
(412 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig167 325 5e-89
>3x_Contig167
Length = 745
Score = 325 bits (158), Expect = 5e-89
Identities = 237/274 (86%), Gaps = 1/274 (0%)
Strand = Plus / Minus
Query: 37 ataataatattattaaatcaantaataanaataataatamymncccccccgactcctctc 96
|||||||||||| ||||||| |||||| ||| |||||| |||| | ||||||||||
Sbjct: 284 ataataatattaccaaatcaaataataataattataataataaccccgcggactcctctc 225
Query: 97 ctngtaatcccasgggagsasccgcgscgaaattatataawaytawttaaaaaaataata 156
|| ||||||||| ||||| | ||||| | ||||| | || ||| || ||||||
Sbjct: 224 ctggtaatcccaggggaggagccgcgggaagggggtataatattatttatgaagataata 165
Query: 157 atattaatactagckccyaayaatatttwaatgtttaaatatttagtaggatgatcaatt 216
|||||||||||| | || || ||||||| |||||||||||||||||||||||||||||||
Sbjct: 164 atattaatactatc-cctaataatattttaatgtttaaatatttagtaggatgatcaatt 106
Query: 217 caattaaaaggtagatwatctaataataaatcwatttctagatctaatacaatgaatatt 276
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 105 caattaaaaggtagattatctaataataaatctatttctagatctaatacaatgaatatt 46
Query: 277 ttaaawggtacattccaaaactataaatatattt 310
||||| ||||||||||||||||||||||||||||
Sbjct: 45 ttaaatggtacattccaaaactataaatatattt 12
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3930
Number of Sequences: 1807
Number of extensions: 3930
Number of successful extensions: 166
Number of sequences better than 1.0e-20: 1
length of query: 412
length of database: 10,358,551
effective HSP length: 15
effective length of query: 397
effective length of database: 10,331,446
effective search space: 4101584062
effective search space used: 4101584062
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 48 (99.1 bits)